USEFUL INFORMATION TO USE SEQUINS
Download documents including laboratory protocols, software user manuals, useful information on shipping and storing sequins, and white papers describing use and validation of sequins designs and concepts.
|RNA_LabProtocol.pdf||RNA – Laboratory protocol for using sequins in RNA sequencing applications.|
|Meta_LabProtocol.pdf||METAGENOME – Laboratory protocol for using sequins in metagenome applications.|
|UserGuide_v2.0.1.pdf||ANAQUIN – software user guide.|
|RNAsequins_MSDS.pdf||Material safety data sheet (MSDS) for RNA sequins.|
|DNAsequins_MSDS.pdf||Material safety data sheet (MSDS) for DNA sequins.|
|Shipping_Info.pdf||Shipping information for the sequins.|
|Customs_Declaration.pdf||Example customs declaration sheet that accompanies the sequins.|
ANNOTATIONS & MIXTURES
RESOURCE FILES FOR THE ANALYSIS OF SEQUINS
Sequins represent features, such as genes or variation, of the human genome. Annotation files indicate the location and abundance of such features, and adhere to standard data-formats wherever possible.
|RNAsequins.v2.2.gtf||RNA – synthetic gene loci annotations||GTF|
|RNAsequins.v2.2.fa||RNA – sequin nucleotide sequences||FA|
|RNAsequins_isoform_mix.v2.2||RNA – concentration of isoform sequins in Mix A and B||TSV|
|RNAsequins_gene_mix.v2.2||RNA – concentration of gene sequins in Mix A and B||TSV|
|chrIS.fa||RNA – In silico chromosome||FA|
|Metasequins_details.txt||METAGENOME – sequin details, concentrations, and sequences||TXT|
EXAMPLE LIBRARIES FROM EACH SEQUIN MIXTURE
A range of simulated and experimental read libraries are available for download for example usage. These are to be used to complete tutorials and for users to familiarize themselves with the use and analysis of sequins.Additionally, we provide a neat sequenced library for each batch of sequins we release. Users may wish to check their sequencing and analysis relative to these reference libraries for troubleshooting or benchmarking purposes.
|RNAsequins_mixA_rep1||RNA sequins mix A neat library (replicate 1)||.TXT||.FQ||.FQ|
|RNAsequins_mixA_rep2||RNA sequins mix A neat library (replicate 2)||.TXT||.FQ||.FQ|
|RNAsequins_mixA_rep3||RNA sequins mix A neat library (replicate 3)||.TXT||.FQ||.FQ|
|RNAsequins_mixB_rep1||RNA sequins mix B neat library (replicate 1)||.TXT||.FQ||.FQ|
|RNAsequins_mixB_rep2||RNA sequins mix B neat library (replicate 2)||.TXT||.FQ||.FQ|
|RNAsequins_mixB_rep3||RNA sequins mix B neat library (replicate 3)||.TXT||.FQ||.FQ|
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